DeepSEA analysis
DeepSEA is a deep learning-based algorithmic framework for predicting the chromatin effects of sequence alterations with single nucleotide sensitivity.

Submit a DeepSEA Analysis

        To predict variant effects, upload a VCF file. To predict DNA sequence features, upload a FASTA file (DNA sequence) or a BED file (genomic region in hg19 coordinates).

        File descriptions

        DeepSEA predicts genomic variant effects on a wide range of chromatin features at the variant position: transcription factors binding, DNase I hypersensitive sites, and histone marks in multiple human cell types. Visitfor addtional help and details.